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Пакет: unique-sam
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%define _unpackaged_files_terminate_build 1
Name: unique-sam
Version: 0.2.4
Release: alt1
Summary: Analyse sam file and keep the unique aligment record
License: BSD
Group: Development/Python
Url: https://pypi.python.org/pypi/unique-sam/
Packager: Eugeny A. Rostovtsev (REAL) <real at altlinux.org>
# https://github.com/dlmeduLi/unique-sam.git
Source0: https://pypi.python.org/packages/03/16/51c6c02140d2ce6ab9d71615341bdb0383d0a137e790868445161f93cb9b/%{name}-%{version}.tar.gz
BuildArch: noarch
BuildPreReq: python-module-setuptools-tests python-module-libsam
%py_provides unique_sam
%py_requires libsam
%description
Unique-Sam is a simple command line tool to remove the duplicated
alignments in the SAM file. If the MAPQ field of the alignment is
available, unique-sam will keep one and only one alignment with the
highest score. Otherwise, unique-sam will calculate a score according to
the alignment's MD or CIGAR field and use the calculated value to remove
the duplicated alignments.
%prep
%setup -q
%build
%python_build_debug
%install
%python_install
%check
python setup.py test
%files
%doc *.rst PKG-INFO
%_bindir/*
%python_sitelibdir/*
%changelog
…
Полный changelog можно просмотреть здесь
Name: unique-sam
Version: 0.2.4
Release: alt1
Summary: Analyse sam file and keep the unique aligment record
License: BSD
Group: Development/Python
Url: https://pypi.python.org/pypi/unique-sam/
Packager: Eugeny A. Rostovtsev (REAL) <real at altlinux.org>
# https://github.com/dlmeduLi/unique-sam.git
Source0: https://pypi.python.org/packages/03/16/51c6c02140d2ce6ab9d71615341bdb0383d0a137e790868445161f93cb9b/%{name}-%{version}.tar.gz
BuildArch: noarch
BuildPreReq: python-module-setuptools-tests python-module-libsam
%py_provides unique_sam
%py_requires libsam
%description
Unique-Sam is a simple command line tool to remove the duplicated
alignments in the SAM file. If the MAPQ field of the alignment is
available, unique-sam will keep one and only one alignment with the
highest score. Otherwise, unique-sam will calculate a score according to
the alignment's MD or CIGAR field and use the calculated value to remove
the duplicated alignments.
%prep
%setup -q
%build
%python_build_debug
%install
%python_install
%check
python setup.py test
%files
%doc *.rst PKG-INFO
%_bindir/*
%python_sitelibdir/*
%changelog
…
Полный changelog можно просмотреть здесь